Brain Segments Calculation

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Brain Segments Calculation

The stereotactic normalization result is shown on the NORMALIZED page.


Please verify that the normalization procedure was successful by evaluating the alignment in different parts of the brain. Activation of the iso-contour lines can be particularly helpful. The thresholds on the TEMPLATE and the NORMALIZED panel should be adjusted so that the lines follow similar structures (e.g. approximating the outer contour of the cerebral cortex). The final brain structure outlines will only be adequate if the normalization was successful.

To start the mapping of the atlas brain structures to the subject space please activate the Segment Brain action button.